posted by organizer: daian76 || 2758 views || tracked by 6 users: [display]

HPC-BIO 2015 : Special Session on ADVANCES IN HIGH-PERFORMANCE BIOINFORMATICS, SYSTEMS AND SYNTHETIC BIOLOGY hosted by 23rd Euromicro PDP Conference

FacebookTwitterLinkedInGoogle

Link: http://www.pdp2015.org/specialsessions/bio/bio.html
 
When Mar 4, 2015 - Mar 6, 2015
Where Turku, Finland
Submission Deadline Sep 1, 2014
Notification Due Oct 25, 2014
Final Version Due Nov 10, 2014
Categories    bioinformatics   high performance computing   grid computing   parallel computing
 

Call For Papers

The computational approach to biology is dealing with an enormous availability of data and an extreme complexity in the modelling and analysis of life systems. Both these issues make the scaling-up promise of High Performance Computing extremely appealing. Currently, the possibility of parallelising algorithms and analysis techniques exploiting the various HPC emerging frameworks is receiving a lot of interest. Examples include the porting of legacy applications to clusters, e.g. those for genome analysis, and the use of distributed technologies, cloud computing, on-chip supercomputing, GPGPUs, and massively parallel architectures for the treatment of high-throughput data-sets (e.g. Xeon Phi implementations). Arguably, HPC will turn out to be an unifying aspect of the future integration of Bioinformatics, Systems and Synthetic Biology.

The aim of this special session is to present the latest efforts in HP Computational Biology and to foster the integration of researchers interested in HPC and Computational Biology.


Examples of topics of interest include, but are not limited to, HPC experiences in:

- Algorithms for genomics and proteomics
- DNA assembly and mapping
- Bio-Molecular sequence analysis
- Gene identification and annotation
- SNP analysis and classification
- Differential gene expression analysis and clustering techniques
- Phylogeny reconstruction algorithms
- Biological databases for big data management
- Modelling and simulation of biological systems
- Automated verification in Computational Biology
- Virtual labs and experiments
- HPC-based approaches in Synthetic Biology
- DNA-based biological circuits simulations
- Modelling of structural protein properties
- Parallel architectures for Computational Biology
- System infrastructure for high throughput analysis

Related Resources

HPC 2019   High Performance Computing
ACIIDS 2018   10th Asian Conference on Intelligent Information and Database Systems
HPCA 2019   The 25th International Symposium on High-Performance Computer Architecture
NECO 2018   7th International Conference of Networks and Communications
MLHPC 2018   The 4th Workshop on Machine Learning in HPC Environments - in conjunction with Supercomputing
IJAB 2018   International Journal of Advances in Biology
HPCSYSPROS 2018   HPC Systems Professional Workshop
ParCo 2019   Parallel Computing Conference
SIPRO 2019   5th International Conference on Signal and Image Processing
FTXS 2018   Fault Tolerance for HPC at eXtreme Scale (FTXS) Workshop